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TReg dysfunctIon
A well-functioning immune system carefully distinguishes between harmful pathogens and the body’s own tissues, a process known as self-tolerance. When self-tolerance is disrupted, autoreactive T cells evade regulatory mechanisms and mistakenly attack healthy tissues, known as autoimmunity.[1]
To prevent such inappropriate immune activation, the immune system relies heavily on a specialized subset of T cells known as regulatory T cells (Tregs), which play a central role in maintaining immune balance and preserving self-tolerance. Tregs effectively serve as critical gatekeepers, functioning like brakes that restrain autoreactive immune responses and prevent damage to healthy tissues.
Therefore, when Tregs become functionally impaired or lose their stability, their suppressive capacity diminishes. As a result, autoreactive immune cells proliferate unchecked, leading to dysregulated immune activation and the onset or progression of autoimmune diseases.[2]
Whilst Treg dysfunction has been implicated across almost all major autoimmune diseases, it is not always the sole cause of autoimmunity, but rather a significant contributing factor alongside genetic predisposition, environmental triggers, and other forms of immune dysregulation, particularly by viral infection.[10][11][12]
For Tregs to function well, they require stable expression of the FOXP3 transcription factor, which is a special protein that acts like a master switch. It controls which genes are turned on or off, necessary for Treg development, stability, and their ability to suppress inappropriate immune responses.
Tregs also depend on adequate levels of interleukin-2 (IL-2), a cytokine that supports their survival, proliferation, and ability to suppress other immune cells. In addition, Tregs require a balanced metabolic environment, nutritional requirements met, and protection from pro-inflammatory cytokines, particularly IL-6 and TNF-α, which can impair their function or destabilize their identity.[2]
Targeting key nutritional, metabolic, microbiome, and lifestyle factors that promote FOXP3 expression and stability, support IL-2 availability and signalling, and reduce pro-inflammatory cytokine activity is essential for improving Treg stability and function in order to address the fundamental loss of immune tolerance that drives autoimmune disease.
diagnosis
Autoimmune Diagnosis
With a formal diagnosis of any of the following autoimmune diseases, Treg Dysfunction and elevated IL-6 are strongly implicated in each of them:
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Psoriasis
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Rheumatoid Arthritis
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Coeliac Disease
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Hashimoto’s Thyroiditis
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Vitiligo
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Type 1 Diabetes
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Graves Disease
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Alopecia Areata
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Multiple Sclerosis
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Ankylosing Spondylitis
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Ulcerative Colitis
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Crohn’s Disease
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Systemic Lupus Erythematosus
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Sjogren's Syndrome
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Autoimmune Gastritis
[3][5][6][7][8][9][17][18]
Recurrent Herpes Simplex Outbreaks
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Coldsores
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Gential Blisters / Ulcerations
Herpes simplex virus 1 + 2 outbreaks which are responsible for the manifestation of cold sores and genital blisters are controlled closely by regulatory T-cells (Tregs). Tregs act as coordinators, making sure the immune system responds strongly enough to clear the virus but also in the correct way. Research shows that when Tregs are low in numbers or not working properly, HSV spreads more quickly, viral levels stay higher, and the infection can even reach the nervous system earlier.
Tregs do this by helping dendritic cells, the messengers of the immune system, to travel from the infected tissue to the nearby lymph nodes, where they show viral fragments to CD4 T-cells. This ‘priming’ step is crucial, without it, CD4 T-cells don’t multiply or move into the infected tissue properly, which means the virus isn’t controlled. A key part of this process relies on a molecule called CTLA-4, which Tregs use to regulate dendritic cell migration and ensure the right communication happens.
Simply, if Treg numbers are too low, or their function is impaired, the immune system can’t get its CD4 T-cells into position to fight HSV. This makes outbreaks more severe and harder to control. [54]
FLagging signs
Causes
Immune Imbalance
The cornerstone of Treg dysfunction lies in FOXP3 instability and impaired expression, which critically disrupt the development, maintenance, and suppressive capacity of Tregs. This FOXP3 dysregulation is predominantly driven by a very specific immune imbalance characterized by:
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Elevated Interleukin-6 (IL-6)
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Elevated Tumor Necrosis Factor-Alpha (TNF-α)
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IL-2 Deficiency
Elevated IL-6
The development of Tregs relies heavily on a protein known as TGF-β. When TGF-β is alone, it promotes the expression of FOXP3, which is the gene expression that drives the development of Tregs, helping to maintain immune tolerance and prevent autoimmunity.
However in the presence of pro-inflammatory cytokines, particularly interleukin-6 (IL-6), this balance shifts. IL-6, essentially acts as a switch interfering with FOXP3 induction, thereby inhibiting Treg development, and even promoting the development of pro-inflammatory TH17 cells over Tregs’, which tips the immune balance toward autoimmunity.
It is important to note that chronic IL-6 responses encourage immune cells to upregulate IL-6 receptor expression, making them hyper-responsive to IL-6 and strongly activating the STAT3 signaling pathway. This then amplifies their resistance to Treg-mediated suppression, even when Tregs are present and functional. This underscores that the severity of autoimmune activity influences the complexity and duration of achieving disease control and remission. [1][2][3]
Elevated TNF-α
TNF-α is a major inflammatory molecule that plays a role in driving immune system attacks. One of the ways it contributes to autoimmunity is by interfering with the stability of FOXP3, the master switch allowing Tregs to suppress excessive immune responses and maintain balance. Without stable FOXP3, Tregs lose their ability to control overactive immune cells effectively. As a result, immune cells become less regulated, leading to stronger and longer-lasting inflammation, a cornerstone of autoimmunity.
TNF-α also makes the immune attack stronger by activating dendritic cells, which turn on immune responses. This leads to hyperactive immune activity, making it harder for Tregs to control inflammatory responses.[6]
IL-2 Deficiency
The cytokine Interleukin-2 (IL-2) plays a critical role in the survival, development, and function of Tregs. This is because IL-2 is essential for maintaining the expression of FOXP3, the key gene expression that defines Treg identity and stability. Without IL-2 signaling, FOXP3 expression is reduced, compromising the formation and maintenance of Tregs.[8]
Chronic immune activation progressively depletes Interleukin-2 (IL-2) availability, as persistent inflammation shifts immune resources toward effector T-cell expansion and pro-inflammatory pathways, IL-2 synthesis becomes insufficient to support Treg survival and function. This IL-2 deficiency further destabilizes FOXP3 expression, exacerbating Treg collapse and loss of peripheral tolerance, fueling the progression toward autoimmunity.[21]
Chronic Infections
A central underlying factor contributing to the immune imbalance associated with Treg Dysfunction is the presence of chronic infections, which serve as persistent immunological triggers. These include:
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SIBO
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Candiadiasis
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Helminth infection
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Protozoa Infection
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Herpes Simplex Virus
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Epstein Barr Virus
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Mycotoxicosis
During these infections, both IL-6 and TNF-α are elevated as part of the body’s highly coordinated immune response. The process begins when invading pathogens, such as bacteria, viruses, fungi, and parasites are recognized by receptors, located on immune cells.
These receptors identify molecular patterns on the pathogenic microbes themselves, and the recognition of these patterns activates intracellular signaling cascades, prominently the NF-κB pathway, which triggers the transcription and release of TNF-α and IL-6.
TNF-α, acts as an early amplifier of inflammation, recruiting additional immune cells and promoting further cytokine release. IL-6 modulates T cell differentiation, enhancing antibody production, and regulates systemic inflammation. [19][20] While these processes are vital for controlling infections, the persistent release of IL-6 and TNF-α drives Treg dysfunction as detailed below.
Tissue Injury
When cells become injured, stressed, or die, they release internal molecules into the extracellular space which are recognized by receptors on immune cells. This recognition serves as a danger signal to the immune system, indicating that tissue damage has occurred and trigger intracellular signaling cascades, most notably the nuclear factor kappa B (NF-κB) pathway, which increases the production of IL-6 and TNF-α [19][20] Both of which are responsible for Treg dysfunction and autoimmune development.
Psychological Stress [ Sympathetic Dominance ]
Multiple studies have demonstrated that psychological stress is a potent driver of elevated IL-6 levels through dysregulated neuroendocrine and inflammatory pathways. Clinical studies also demonstrate individuals exposed to chronic stress or early life adversity exhibit exaggerated IL-6 when in response to acute stressors, suggesting long-term priming of the inflammatory system from long-term stress,[22] thereby supporting the pathogenesis of autoimmunity.
Chronic Stress [ HPA Hypofunction ]
When exposed to prolonged stress, mental or physical (inflammatory), the hypothalamic pituitary adrenal (HPA) axis becomes dysregulated, often resulting in blunted cortisol responses. Cortisol normally serves as an anti-inflammatory signal that dampens immune activation, including suppressing cytokines such as IL-6 and TNF-α. A diminished cortisol response removes this critical brake, allowing exaggerated IL-6 and TNF-α production during subsequent inflammatory triggers, [22] thereby supporting the pathogenesis of autoimmunity.
Nutritional deficiencies
Certain nutrients play a critical role in the development, maintenance, and functional stability of Tregs, primarily through their effects on FOXP3 expression, Treg metabolism, and the broader immune microenvironment. Therefore, certain nutritional deficiencies can compromise Treg development and stability, leaving individuals more susceptible to chronic inflammation and autoimmunity.
Heavy Metal Toxicity
Heavy metal toxicity promotes the overproduction of pro-inflammatory cytokines, such as TNF-α and IL-6, which contributes to regulatory T cell (Treg) dysfunction. Additionally, heavy metals induce significant oxidative stress, further impairing Treg function and skewing immune responses toward autoimmunity [46]. Beyond this heavy metals contribute to auto-immune development by binding to specific sulfur groups in the body's proteins, which changes the protein’s structure. This change creates foreign-looking proteins, which the immune system can mistakenly attack. [47]
Oxidative Stress
Elevated levels of reactive oxygen species (ROS) within Tregs are strongly associated with diminished function and impaired expression of FOXP3, the master transcription factor essential for maintaining Treg stability and regulatory capacity.
Furthermore, excessive ROS also drives activation of the mTOR signaling pathway, which skews Treg function away from restraining autoactive responses and toward pro-inflammatory responses, which is characterized by the production of cytokines such as IL-17 upon ROS exposure, further compromising immune tolerance [23]
Allergies [ Mast Cell Activation ] [ Histamine Intolerance ]
Mast cells and histamine, both central players in allergic responses, have been shown to impair regulatory Treg function and stability by fostering a pro-inflammatory environment that overrides their restraint on autoreactive immune responses.
Mast cells promote the secretion of interleukin-6 (IL-6), which not only diminishes Treg suppressive function but also drives their conversion into pro-inflammatory Th17 cells. Additionally, mast cells express the costimulatory ligand OX40L, which further impairs FOXP3 expression, the master regulator of Treg identity, and facilitates the shift of Tregs toward a pro-inflammatory phenotype.
In parallel, histamine disrupts Treg stability by suppressing local levels of transforming growth factor-beta 1 (TGF-β1), a cytokine essential for Treg development, maintenance, and immunosuppressive activity. By limiting TGF-β1 availability, histamine reduces Treg infiltration into inflamed tissues, thereby weakening immune regulation and exacerbating autoimmunity. [24][25]
References
[1] https://pubmed.ncbi.nlm.nih.gov/18510923/
[2] https://pmc.ncbi.nlm.nih.gov/articles/PMC6066374/
[3] https://pmc.ncbi.nlm.nih.gov/articles/PMC6280661/
[4] https://pmc.ncbi.nlm.nih.gov/articles/PMC2722959/
[5] https://pmc.ncbi.nlm.nih.gov/articles/PMC8716637/
[6].https://www.frontiersin.org/journals/immunology/articles/10.3389/fimmu.2022.973813/full
[7] https://pmc.ncbi.nlm.nih.gov/articles/PMC9791026/
[8] https://www.nature.com/articles/ni.3540
[9] https://pmc.ncbi.nlm.nih.gov/articles/PMC503774/
[10] https://pmc.ncbi.nlm.nih.gov/articles/PMC3732823/
[11] https://pmc.ncbi.nlm.nih.gov/articles/PMC6591146/
[12].https://www.sciencedirect.com/science/article/pii/S2589909021000502
[13] https://pmc.ncbi.nlm.nih.gov/articles/PMC4345261/
[14] https://pubmed.ncbi.nlm.nih.gov/8768861/
[15] https://pubmed.ncbi.nlm.nih.gov/38783442/
[16] https://pubmed.ncbi.nlm.nih.gov/9195514/
[17] https://pmc.ncbi.nlm.nih.gov/articles/PMC10572745/
[18] https://pubmed.ncbi.nlm.nih.gov/36164321/
[19] https://pmc.ncbi.nlm.nih.gov/articles/PMC4176007/
[20].https://www.sciencedirect.com/org/science/article/pii/S1874210619001212
[21] https://ajp.amjpathol.org/article/S0002-9440(20)30250-9/fulltext
[22] https://pmc.ncbi.nlm.nih.gov/articles/PMC4828497/
[23] https://pubmed.ncbi.nlm.nih.gov/34950150/
[24] https://pubmed.ncbi.nlm.nih.gov/25651189/
[25] https://ashpublications.org/blood/article/114/13/2639/26414
[26] https://pmc.ncbi.nlm.nih.gov/articles/PMC4125122/
[27] https://pmc.ncbi.nlm.nih.gov/articles/PMC6759203/
[28] https://pubmed.ncbi.nlm.nih.gov/29153546/
[29] https://pubmed.ncbi.nlm.nih.gov/23861993/
[30].https://www.sciencedirect.com/science/article/pii/S0006295222003057
[31] https://pubmed.ncbi.nlm.nih.gov/35628549/
[32].https://www.frontiersin.org/journals/nutrition/articles/10.3389/fnut.2022.878382/full
[33] https://pubmed.ncbi.nlm.nih.gov/22749847/
[34] https://pmc.ncbi.nlm.nih.gov/articles/PMC5893381/
[35].https://www.sciencedirect.com/science/article/pii/S0946672X24001767
[36] https://pubmed.ncbi.nlm.nih.gov/20201035/
[37] https://pubmed.ncbi.nlm.nih.gov/24176237/
[38] https://pmc.ncbi.nlm.nih.gov/articles/PMC10295352/
[39].https://www.sciencedirect.com/science/article/pii/S0753332220313500
[40] https://pmc.ncbi.nlm.nih.gov/articles/PMC6606836/
[41] https://pmc.ncbi.nlm.nih.gov/articles/PMC6365338/
[42] https://pmc.ncbi.nlm.nih.gov/articles/PMC3659612/
[43] https://pmc.ncbi.nlm.nih.gov/articles/PMC2673744/
[44] https://pmc.ncbi.nlm.nih.gov/articles/PMC7772281/
[45] https://pmc.ncbi.nlm.nih.gov/articles/PMC2610846/
[46] https://www.jmchemsci.com/article_209422_59fb01ab799639db4a9b9f4177f21f0c.pdf
[47].https://www.sciencedirect.com/science/article/abs/pii/S0013935120304345
[48].https://www.sciencedirect.com/science/article/pii/S1110116422000928
[49] https://pubmed.ncbi.nlm.nih.gov/9470915/
[50] https://pubmed.ncbi.nlm.nih.gov/18318707/
[51].https://www.frontiersin.org/journals/immunology/articles/10.3389/fimmu.2022.1013900/full
[52] https://pubmed.ncbi.nlm.nih.gov/31957941/
[53] https://pmc.ncbi.nlm.nih.gov/articles/PMC10607549/
[54] https://pmc.ncbi.nlm.nih.gov/articles/PMC5035160/
[55] https://pmc.ncbi.nlm.nih.gov/articles/PMC9559187/
Autoimmune conditions can often go undiagnosed because symptoms are wide-ranging, overlap with many other health issues, and may come and go in unpredictable cycles. Clinically, this makes it important to pay close attention to patterns of recurring or unexplained signs and symptoms within the body.
Recognising warning signs can determine whether testing for autoimmunity is appropriate, allowing for earlier treatment before the condition progresses or causes long-term complications. The following physical manifestations are demonstrated against the above mentioned autoimmune conditions. You will be flagged for testing if presenting with the mentioned signs, alongside other relevant symptoms.
Nail Ridging
Physical manifestation prevalent in
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73% of Rheumatoid Arthritis Patients
Nail ridging are vertical lines that run from the base to the tip of the nail. They look like fine grooves or raised lines on the nail surface, giving it a slightly corrugated or lined texture.
Nail ridging is strongly associated with rheumatoid arthritis and results from a combination of vascular and inflammatory mechanisms involved. This includes disturbance in blood flow, together with fibroblast proliferation and abnormal deposition of mucoid material, which interferes with normal keratinization, producing the characteristic longitudinal ridges seen on the nail surface.
A study involving 230 patients with RA and 97 controls demonstrated that 73% of RA patients had nail ridging, compared to only 20% of controls. Importantly, the severity of nail ridging strongly correlated with overall disease activity, for every point increase in RA Activity Scoring, there was a 153-fold increase in the likelihood of exhibiting nail ridging.[48]
Nail Clubbing
Physical manifestation prevalent in
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48% of Rheumatoid Arthritis Patients
Nail clubbing is when the normal diamond-shaped gap between opposing thumbnails disappears when put together, and the tips of the nails curve away from one another, which is known as the Schamroth test.
While there are many conditions that contribute to clubbing, it can occur with rheumatoid arthritis due to the involvement of vascular endothelial growth factor, which promotes vascular changes that contribute to the formation of clubbed nails. In a case-control study comparing 50 people with rheumatoid arthritis to 50 controls, 48% of RA patients had clubbing of at least one fingernail versus 20% of controls, estimating a 2.4-fold higher prevalence in RA. [49]
Canker Sores - Mouth Ulcers
Physical manifestation prevalent in
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37% of Crohn's Disease Patients
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5 - 10% of Ulcerative Colitis Patients
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3% of Celiac Disease
Canker sores, also called recurrent aphthous stomatitis (RAS), are small but painful ulcers that appear inside the mouth, often on the inner lip but can also be on the cheeks, or tongue. They are round with a white or yellow base and a red border, and unlike cold sores, they only occur on the inside of the lips.
Research shows that people who get frequent canker sores often have Tregs dysfunction with clinical studies demonstrating in RAS that Tregs are both fewer in number and approximately half as efficient in activity. This subsequently prevents other immune cells from overreacting and disables control, allowing the immune system to mistakenly attack the lining of the mouth, leading to the painful mouth sores that occur. [50]
[51][52][52]
Angular cheilitis
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12 - 22% of Ulcerative Colitis Patients
Angular cheilitis, which presents as cracks or inflammation at the corners of the mouth, is one of the oral manifestations associated with ulcerative colitis (UC). Its occurrence in UC is thought to stem from chronic immune dysregulation and mucosal inflammation, which is activity that can lead to the breakdown of the delicate epithelium at the lip commissures. This environment makes the corners of the mouth more susceptible to irritation, infection, and fissuring.
Clinical studies report that angular cheilitis is present in approximately 12 - 22% of patients with ulcerative colitis, highlighting it as a relatively common extraintestinal feature of the disease. Its recognition is clinically useful, as it may indicate active disease or reflect underlying nutritional deficiencies that frequently accompany UC. [51]
Atrophic Glossitis
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Observed in Ulcerative Colitis
Atrophic glossitis appears as patches on the tongue that are smooth and shiny caused by the loss of the small surface projections (papillae). This change can be a subtle sign of ulcerative colitis. The connection exists because UC often leads to poor nutrient absorption, especially of iron, folate, and vitamin B12, due to chronic gut inflammation and mucosal damage. These nutrients are vital for maintaining healthy oral tissues, and when they’re depleted, the tongue’s surface becomes thin and inflamed. [55]

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